African Trypanosome Molecular Biology Laboratory

Teaching

Research Degree (Ph.D.) Coordinator: PMB Unit
Research degree information:
RD committee
RD student handbook 2007/8
RD Regulations
Nomination of examiners form
The Good Viva Video
RD Tuition Fees and Expenses 2006-07

Chair: M.Sc. MBID Exam Board - to 2008
M.Sc. information:
General links
M.Sc. module handbook
Exam board guidance notes
General regulations
Individual M.Sc. regulations
Exam procedures & regulations
M.Sc. marking scheme
Past exam papers

Animations

Click here for an excellent CGI from Harvard - The inner life of the Cell.

Click here for malaria and molecular biology movies from WEHI.

Click here for Animations of PCR and other molecular biology techniques.

Click here for Phage infection animation

Click here for Biochemistry, Physiology, Genetics and Cell Biology animations

Click here for Cell Biology animations

Click here for Immunology animations


Lectures 2008-2009:

Antigenic Variation in Plasmodium falciparum Infected Erythrocytes (3160)


Selected reading:
  • Miller et al (2002) The pathogenic basis of malaria. Nature 415:673-9
  • Deitsch & Hviid (2004) Variant surface antigens, virulence genes and the pathogenesis of malaria. Trends in Parasitol 20:562-66
  • Kraemer & Smith (2006) A family affair: var genes, PfEMP1 binding, and malaria disease. Curr. Opin. Microbiol. 4:374-80
  • Scherf et al (2008) Antigenic variation in Plasmodium falciparum. Ann. Rev. Microbiol. 62:445-70
P. falciparum life cycle: Animation
 
Structure and Organisation of Chromosomes (3158)
Tue 3rd Mar: 11am.

Selected reading:
  • Book chapter: The flow of genetic information PDF
Chromatin packaging animation
Additional animations
 
Trypanosome Molecular Biology: Antigenic Variation in Trypanosoma brucei (3160)


Selected reading:
  • Pays (2005) Regulation of antigen gene expression in Trypanosoma brucei. Trends Parasitol 21:517-20.
  • Baral TN et al., (2006) Experimental therapy of African trypanosomiasis with a nanobody-conjugated human trypanolytic factor. Nature Med. 12:580-4.
  • Taylor JE and Rudenko G. (2006) Switching trypanosome coats: what’s in the wardrobe? Trends Genet. 22:614-20.
  • TriTryp sequencing papers: 2005 in Science
 
Antimicrobial Chemotherapy - syndicate (3169)
Wed 22nd April: 4pm.

Selected reading:
  • Bray et al (2003) Pentamidine uptake and resistance in pathogenic protozoa. Trends Parasitol 5:232-9
  • Gelb et al (2003) Protein farnesyl and N-myristoyl transferases. Mol Biochem Parasitol 126:155-63
  • Smith et al (2004) GPI biosynthesis as a drug target against African sleeping sickness. EMBO J 23:4701-8
  • Cowman & Crabb (2003) Functional genomics: identifying drug targets for parasitic diseases. Trends Parasitol 11:538-43
  • Gelb & Hol (2002) Drugs to combat tropical protozoan parasites. Science 297:343-4
Gene Expression in Prokaryotes and Eukaryotes (C3333)
 
African Trypanosomaiasis: Life Cycle and Pathology (3122)
 


Essays & Tutorials

Click here to access online versions of Molecular Biology of the Cell, Alberts et al, Molecular Cell Biology, Lodish et al, and several other textbooks

Access Ben Lewin's Ergito / Virtual Text site here. Includes Genes 2000 and 100 essays on "great experiments"

Click here for NCBI tutorials on Bioinformatics

Access information on the Cell Nucleus here

Click here for additional online lectures, graphics and animations